Search Results for author: Muhammad Febrian Rachmadi

Found 5 papers, 3 papers with code

White Matter Hyperintensities Segmentation Using Probabilistic TransUNet

no code implementations6 May 2023 Muhammad Noor Dwi Eldianto, Muhammad Febrian Rachmadi, Wisnu Jatmiko

However, there are two common issues in the detection of WMH: high ambiguity and difficulty in detecting small WMH.

Semantic Segmentation

Improving Segmentation of Objects with Varying Sizes in Biomedical Images using Instance-wise and Center-of-Instance Segmentation Loss Function

1 code implementation13 Apr 2023 Muhammad Febrian Rachmadi, Charissa Poon, Henrik Skibbe

In this paper, we propose a novel two-component loss for biomedical image segmentation tasks called the Instance-wise and Center-of-Instance (ICI) loss, a loss function that addresses the instance imbalance problem commonly encountered when using pixel-wise loss functions such as the Dice loss.

Image Segmentation Instance Segmentation +3

An automated pipeline to create an atlas of in situ hybridization gene expression data in the adult marmoset brain

1 code implementation13 Mar 2023 Charissa Poon, Muhammad Febrian Rachmadi, Michal Byra, Matthias Schlachter, Binbin Xu, Tomomi Shimogori, Henrik Skibbe

We present the first automated pipeline to create an atlas of in situ hybridization gene expression in the adult marmoset brain in the same stereotaxic space.

Segmentation

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