Search Results for author: Lauge Sørensen

Found 12 papers, 0 papers with code

CARRNN: A Continuous Autoregressive Recurrent Neural Network for Deep Representation Learning from Sporadic Temporal Data

no code implementations8 Apr 2021 Mostafa Mehdipour Ghazi, Lauge Sørensen, Sébastien Ourselin, Mads Nielsen

Learning temporal patterns from multivariate longitudinal data is challenging especially in cases when data is sporadic, as often seen in, e. g., healthcare applications where the data can suffer from irregularity and asynchronicity as the time between consecutive data points can vary across features and samples, hindering the application of existing deep learning models that are constructed for complete, evenly spaced data with fixed sequence lengths.

ICU Mortality Representation Learning +2

Multi-Domain Adaptation in Brain MRI through Paired Consistency and Adversarial Learning

no code implementations16 Aug 2019 Mauricio Orbes-Arteaga, Thomas Varsavsky, Carole H. Sudre, Zach Eaton-Rosen, Lewis J. Haddow, Lauge Sørensen, Mads Nielsen, Akshay Pai, Sébastien Ourselin, Marc Modat, Parashkev Nachev, M. Jorge Cardoso

Inspired by recent work in semi-supervised learning we introduce a novel method to adapt from one source domain to $n$ target domains (as long as there is paired data covering all domains).

Domain Adaptation

Knowledge distillation for semi-supervised domain adaptation

no code implementations16 Aug 2019 Mauricio Orbes-Arteaga, Jorge Cardoso, Lauge Sørensen, Christian Igel, Sebastien Ourselin, Marc Modat, Mads Nielsen, Akshay Pai

As a result, their performance is significantly lower on data from unseen sources compared to the performance on data from the same source as the training data.

Domain Adaptation Knowledge Distillation +1

Robust parametric modeling of Alzheimer's disease progression

no code implementations14 Aug 2019 Mostafa Mehdipour Ghazi, Mads Nielsen, Akshay Pai, Marc Modat, M. Jorge Cardoso, Sébastien Ourselin, Lauge Sørensen

Different M-estimators and logistic functions, including a novel type proposed in this study, called modified Stannard, are evaluated on the data from the Alzheimer's Disease Neuroimaging Initiative (ADNI) for robust modeling of volumetric MRI and PET biomarkers, CSF measurements, as well as cognitive tests.

Density Estimation

Training recurrent neural networks robust to incomplete data: application to Alzheimer's disease progression modeling

no code implementations17 Mar 2019 Mostafa Mehdipour Ghazi, Mads Nielsen, Akshay Pai, M. Jorge Cardoso, Marc Modat, Sebastien Ourselin, Lauge Sørensen

The proposed LSTM algorithm is applied to model the progression of Alzheimer's disease (AD) using six volumetric magnetic resonance imaging (MRI) biomarkers, i. e., volumes of ventricles, hippocampus, whole brain, fusiform, middle temporal gyrus, and entorhinal cortex, and it is compared to standard LSTM networks with data imputation and a parametric, regression-based DPM method.

Hippocampus Imputation

PADDIT: Probabilistic Augmentation of Data using Diffeomorphic Image Transformation

no code implementations3 Oct 2018 Mauricio Orbes Arteaga, Lauge Sørensen, M. Jorge Cardoso, Marc Modat, Sebastien Ourselin, Stefan Sommer, Mads Nielsen, Christian Igel, Akshay Pai

For proper generalization performance of convolutional neural networks (CNNs) in medical image segmentation, the learnt features should be invariant under particular non-linear shape variations of the input.

Image Segmentation Medical Image Segmentation +1

Simultaneous synthesis of FLAIR and segmentation of white matter hypointensities from T1 MRIs

no code implementations20 Aug 2018 Mauricio Orbes-Arteaga, M. Jorge Cardoso, Lauge Sørensen, Marc Modat, Sébastien Ourselin, Mads Nielsen, Akshay Pai

Segmenting vascular pathologies such as white matter lesions in Brain magnetic resonance images (MRIs) require acquisition of multiple sequences such as T1-weighted (T1-w) --on which lesions appear hypointense-- and fluid attenuated inversion recovery (FLAIR) sequence --where lesions appear hyperintense--.

Imputation Segmentation

A Statistical Model for Simultaneous Template Estimation, Bias Correction, and Registration of 3D Brain Images

no code implementations1 May 2017 Akshay Pai, Stefan Sommer, Lars Lau Raket, Line Kühnel, Sune Darkner, Lauge Sørensen, Mads Nielsen

Template estimation plays a crucial role in computational anatomy since it provides reference frames for performing statistical analysis of the underlying anatomical population variability.

Anatomy Image Registration

Label Stability in Multiple Instance Learning

no code implementations15 Mar 2017 Veronika Cheplygina, Lauge Sørensen, David M. J. Tax, Marleen de Bruijne, Marco Loog

We address the problem of \emph{instance label stability} in multiple instance learning (MIL) classifiers.

Multiple Instance Learning

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