no code implementations • 13 Nov 2019 • Vishwesh Nath, Kurt G. Schilling, Colin B. Hansen, Prasanna Parvathaneni, Allison E. Hainline, Camilo Bermudez, Andrew J. Plassard, Vaibhav Janve, Yurui Gao, Justin A. Blaber, Iwona Stępniewska, Adam W. Anderson, Bennett A. Landman
Confocal histology provides an opportunity to establish intra-voxel fiber orientation distributions that can be used to quantitatively assess the biological relevance of diffusion weighted MRI models, e. g., constrained spherical deconvolution (CSD).
no code implementations • 15 Jul 2019 • Vishwesh Nath, Ilwoo Lyu, Kurt G. Schilling, Prasanna Parvathaneni, Colin B. Hansen, Yucheng Tang, Yuankai Huo, Vaibhav A. Janve, Yurui Gao, Iwona Stepniewska, Adam W. Anderson, Bennett A. Landman
In the in-vivo human data, Deep SHORE was more consistent across scanners with 0. 63 relative to other multi-shell methods 0. 39, 0. 52 and 0. 57 in terms of ACC.
2 code implementations • 28 Mar 2019 • Yuankai Huo, Zhoubing Xu, Yunxi Xiong, Katherine Aboud, Prasanna Parvathaneni, Shunxing Bao, Camilo Bermudez, Susan M. Resnick, Laurie E. Cutting, Bennett A. Landman
To address the first challenge, multiple spatially distributed networks were used in the SLANT method, in which each network learned contextual information for a fixed spatial location.
no code implementations • 10 Nov 2018 • Yuankai Huo, James G. Terry, Jiachen Wang, Vishwesh Nath, Camilo Bermudez, Shunxing Bao, Prasanna Parvathaneni, J. Jeffery Carr, Bennett A. Landman
From the results, the proposed AID-Net achieved the superior performance on classification accuracy (0. 9272) and AUC (0. 9627).
no code implementations • 9 Nov 2018 • Yuankai Huo, Zhoubing Xu, Shunxing Bao, Camilo Bermudez, Hyeonsoo Moon, Prasanna Parvathaneni, Tamara K. Moyo, Michael R. Savona, Albert Assad, Richard G. Abramson, Bennett A. Landman
A clinically acquired cohort containing both T1-weighted (T1w) and T2-weighted (T2w) MRI splenomegaly scans was used to train and evaluate the performance of multi-atlas segmentation (MAS), 2D DCNN networks, and a 3D DCNN network.
no code implementations • 9 Oct 2018 • Vishwesh Nath, Prasanna Parvathaneni, Colin B. Hansen, Allison E. Hainline, Camilo Bermudez, Samuel Remedios, Justin A. Blaber, Kurt G. Schilling, Ilwoo Lyu, Vaibhav Janve, Yurui Gao, Iwona Stepniewska, Baxter P. Rogers, Allen T. Newton, L. Taylor Davis, Jeff Luci, Adam W. Anderson, Bennett A. Landman
Herein, we propose a data-driven tech-nique using a neural network design which exploits two categories of data.
2 code implementations • 1 Jun 2018 • Yuankai Huo, Zhoubing Xu, Katherine Aboud, Prasanna Parvathaneni, Shunxing Bao, Camilo Bermudez, Susan M. Resnick, Laurie E. Cutting, Bennett A. Landman
Whole brain segmentation on a structural magnetic resonance imaging (MRI) is essential in non-invasive investigation for neuroanatomy.
no code implementations • 2 Dec 2017 • Yuankai Huo, Shunxing Bao, Prasanna Parvathaneni, Bennett A. Landman
Herein, the MaCRUISE surface parcellation (MaCRUISEsp) method is proposed to perform the surface parcellation upon the inner, central and outer surfaces that are reconstructed from MaCRUISE.