Search Results for author: Robert Gray

Found 14 papers, 5 papers with code

Patch-CNN: Training data-efficient deep learning for high-fidelity diffusion tensor estimation from minimal diffusion protocols

no code implementations3 Jul 2023 Tobias Goodwin-Allcock, Ting Gong, Robert Gray, Parashkev Nachev, HUI ZHANG

To overcome these limitations, we propose Patch-CNN, a neural network with a minimal (non-voxel-wise) convolutional kernel (3$\times$3$\times$3).

Deep Variational Lesion-Deficit Mapping

1 code implementation27 May 2023 Guilherme Pombo, Robert Gray, Amy P. K. Nelson, Chris Foulon, John Ashburner, Parashkev Nachev

Here we initiate the application of deep generative neural network architectures to the task of lesion-deficit inference, formulating it as the estimation of an expressive hierarchical model of the joint lesion and deficit distributions conditioned on a latent neural substrate.

Brain tumour genetic network signatures of survival

no code implementations15 Jan 2023 James K Ruffle, Samia Mohinta, Guilherme Pombo, Robert Gray, Valeriya Kopanitsa, Faith Lee, Sebastian Brandner, Harpreet Hyare, Parashkev Nachev

Tumour heterogeneity is increasingly recognized as a major obstacle to therapeutic success across neuro-oncology.

How can spherical CNNs benefit ML-based diffusion MRI parameter estimation?

no code implementations1 Jul 2022 Tobias Goodwin-Allcock, Jason McEwen, Robert Gray, Parashkev Nachev, HUI ZHANG

A possible consequence of the lack of rotational equivariance is that the training dataset must contain a diverse range of microstucture orientations.

Equitable modelling of brain imaging by counterfactual augmentation with morphologically constrained 3D deep generative models

no code implementations29 Nov 2021 Guilherme Pombo, Robert Gray, Jorge Cardoso, Sebastien Ourselin, Geraint Rees, John Ashburner, Parashkev Nachev

The model is intended to synthesise counterfactual training data augmentations for downstream discriminative modelling tasks where fidelity is limited by data imbalance, distributional instability, confounding, or underspecification, and exhibits inequitable performance across distinct subpopulations.

counterfactual

Unsupervised Brain Anomaly Detection and Segmentation with Transformers

no code implementations23 Feb 2021 Walter Hugo Lopez Pinaya, Petru-Daniel Tudosiu, Robert Gray, Geraint Rees, Parashkev Nachev, Sebastien Ourselin, M. Jorge Cardoso

Pathological brain appearances may be so heterogeneous as to be intelligible only as anomalies, defined by their deviation from normality rather than any specific pathological characteristic.

Unsupervised Anomaly Detection

Generative Model-Enhanced Human Motion Prediction

2 code implementations5 Oct 2020 Anthony Bourached, Ryan-Rhys Griffiths, Robert Gray, Ashwani Jha, Parashkev Nachev

The task of predicting human motion is complicated by the natural heterogeneity and compositionality of actions, necessitating robustness to distributional shifts as far as out-of-distribution (OoD).

Human motion prediction motion prediction

Bayesian Volumetric Autoregressive generative models for better semisupervised learning

1 code implementation26 Jul 2019 Guilherme Pombo, Robert Gray, Tom Varsavsky, John Ashburner, Parashkev Nachev

Second, we show that reformulating this model to approximate a deep Gaussian process yields a measure of uncertainty that improves the performance of semi-supervised learning, in particular classification performance in settings where the proportion of labelled data is low.

General Classification Semantic Segmentation

NiftyNet: a deep-learning platform for medical imaging

10 code implementations11 Sep 2017 Eli Gibson, Wenqi Li, Carole Sudre, Lucas Fidon, Dzhoshkun I. Shakir, Guotai Wang, Zach Eaton-Rosen, Robert Gray, Tom Doel, Yipeng Hu, Tom Whyntie, Parashkev Nachev, Marc Modat, Dean C. Barratt, Sébastien Ourselin, M. Jorge Cardoso, Tom Vercauteren

NiftyNet provides a modular deep-learning pipeline for a range of medical imaging applications including segmentation, regression, image generation and representation learning applications.

Data Augmentation Image Generation +4

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