Search Results for author: Dewei Hu

Found 16 papers, 8 papers with code

Novel OCT mosaicking pipeline with Feature- and Pixel-based registration

no code implementations21 Nov 2023 Jiacheng Wang, Hao Li, Dewei Hu, Yuankai K. Tao, Ipek Oguz

High-resolution Optical Coherence Tomography (OCT) images are crucial for ophthalmology studies but are limited by their relatively narrow field of view (FoV).

Computational Efficiency

Promise:Prompt-driven 3D Medical Image Segmentation Using Pretrained Image Foundation Models

1 code implementation30 Oct 2023 Hao Li, Han Liu, Dewei Hu, Jiacheng Wang, Ipek Oguz

To address prevalent issues in medical imaging, such as data acquisition challenges and label availability, transfer learning from natural to medical image domains serves as a viable strategy to produce reliable segmentation results.

Image Segmentation Medical Image Segmentation +4

False Negative/Positive Control for SAM on Noisy Medical Images

1 code implementation20 Aug 2023 Xing Yao, Han Liu, Dewei Hu, Daiwei Lu, Ange Lou, Hao Li, Ruining Deng, Gabriel Arenas, Baris Oguz, Nadav Schwartz, Brett C Byram, Ipek Oguz

The method couples multi-box prompt augmentation and an aleatoric uncertainty-based false-negative (FN) and false-positive (FP) correction (FNPC) strategy.

Image Segmentation Medical Image Segmentation +2

CATS v2: Hybrid encoders for robust medical segmentation

2 code implementations11 Aug 2023 Hao Li, Han Liu, Dewei Hu, Xing Yao, Jiacheng Wang, Ipek Oguz

We fuse the information from the convolutional encoder and the transformer at the skip connections of different resolutions to form the final segmentation.

Domain Adaptation Image Segmentation +3

COLosSAL: A Benchmark for Cold-start Active Learning for 3D Medical Image Segmentation

1 code implementation22 Jul 2023 Han Liu, Hao Li, Xing Yao, Yubo Fan, Dewei Hu, Benoit Dawant, Vishwesh Nath, Zhoubing Xu, Ipek Oguz

Cold-start AL is highly relevant in many practical scenarios but has been under-explored, especially for 3D medical segmentation tasks requiring substantial annotation effort.

Active Learning Image Segmentation +3

Deep Angiogram: Trivializing Retinal Vessel Segmentation

no code implementations1 Jul 2023 Dewei Hu, Xing Yao, Jiacheng Wang, Yuankai K. Tao, Ipek Oguz

The generalizability of the synthetic network is improved by the contrastive loss that makes the model less sensitive to variations of image contrast and noisy features.

Retinal Vessel Segmentation Segmentation

Cats: Complementary CNN and Transformer Encoders for Segmentation

no code implementations24 Aug 2022 Hao Li, Dewei Hu, Han Liu, Jiacheng Wang, Ipek Oguz

We fuse the information from the convolutional encoder and the transformer, and pass it to the decoder to obtain the results.

3D Medical Imaging Segmentation Image Segmentation +1

ModDrop++: A Dynamic Filter Network with Intra-subject Co-training for Multiple Sclerosis Lesion Segmentation with Missing Modalities

1 code implementation7 Mar 2022 Han Liu, Yubo Fan, Hao Li, Jiacheng Wang, Dewei Hu, Can Cui, Ho Hin Lee, Huahong Zhang, Ipek Oguz

Previously, a training strategy termed Modality Dropout (ModDrop) has been applied to MS lesion segmentation to achieve the state-of-the-art performance with missing modality.

Lesion Segmentation

Unsupervised Denoising of Retinal OCT with Diffusion Probabilistic Model

1 code implementation27 Jan 2022 Dewei Hu, Yuankai K. Tao, Ipek Oguz

A diffusion process is defined by adding a sequence of Gaussian noise to self-fused OCT b-scans.

Denoising Image Restoration

Unsupervised Cross-Modality Domain Adaptation for Segmenting Vestibular Schwannoma and Cochlea with Data Augmentation and Model Ensemble

no code implementations24 Sep 2021 Hao Li, Dewei Hu, Qibang Zhu, Kathleen E. Larson, Huahong Zhang, Ipek Oguz

To overcome this problem, domain adaptation is an effective way to leverage information from source domain to obtain accurate segmentations without requiring manual labels in target domain.

Data Augmentation Domain Adaptation +2

Retinal OCT Denoising with Pseudo-Multimodal Fusion Network

no code implementations9 Jul 2021 Dewei Hu, Joseph D. Malone, Yigit Atay, Yuankai K. Tao, Ipek Oguz

Evaluated by intensity-based and structural metrics, the result shows that our method can effectively suppress the speckle noise and enhance the contrast between retina layers while the overall structure and small blood vessels are preserved.

Denoising

LIFE: A Generalizable Autodidactic Pipeline for 3D OCT-A Vessel Segmentation

no code implementations9 Jul 2021 Dewei Hu, Can Cui, Hao Li, Kathleen E. Larson, Yuankai K. Tao, Ipek Oguz

We then construct the local intensity fusion encoder (LIFE) to map a given OCT-A volume and its LIF counterpart to a shared latent space.

Retinal Vessel Segmentation Segmentation

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