no code implementations • 17 Nov 2023 • Xiaoyang Chen, Hao Zheng, Yuemeng Li, Yuncong Ma, Liang Ma, Hongming Li, Yong Fan
A versatile medical image segmentation model applicable to images acquired with diverse equipment and protocols can facilitate model deployment and maintenance.
no code implementations • 6 Mar 2023 • Hao Zheng, Hongming Li, Yong Fan
Different from existing deep learning-based cortical surface reconstruction methods that either reconstruct the cortical surfaces separately or neglect the interdependence between the inner and outer surfaces, SurfNN reconstructs both the inner and outer cortical surfaces jointly by training a single network to predict a midthickness surface that lies at the center of the inner and outer cortical surfaces.
1 code implementation • 27 Jan 2023 • BoJian Hou, Hongming Li, Zhicheng Jiao, Zhen Zhou, Hao Zheng, Yong Fan
We learn weights of the expert distributions for individual instances according to their features discriminatively such that each instance's survival information can be characterized by a weighted combination of the learned constant expert distributions.
no code implementations • 21 Jan 2023 • Shujian Yu, Hongming Li, Sigurd Løkse, Robert Jenssen, José C. Príncipe
In this paper, we extend the classic CS divergence to quantify the closeness between two conditional distributions and show that the developed conditional CS divergence can be simply estimated by a kernel density estimator from given samples.
1 code implementation • 16 Jan 2023 • Hongming Li, Shujian Yu, Jose Principe
We propose causal recurrent variational autoencoder (CR-VAE), a novel generative model that is able to learn a Granger causal graph from a multivariate time series x and incorporates the underlying causal mechanism into its data generation process.
1 code implementation • 7 Feb 2022 • Hongming Li, Shujian Yu, Jose C. Principe
We develop a new neural network based independent component analysis (ICA) method by directly minimizing the dependence amongst all extracted components.
no code implementations • 11 Dec 2020 • Hongming Li, Yong Fan
A novel unsupervised deep learning method is developed to identify individual-specific large scale brain functional networks (FNs) from resting-state fMRI (rsfMRI) in an end-to-end learning fashion.
no code implementations • 4 Oct 2020 • Hongming Li, Yong Fan
We present a diffeomorphic image registration algorithm to learn spatial transformations between pairs of images to be registered using fully convolutional networks (FCNs) under a self-supervised learning setting.
1 code implementation • 13 Feb 2020 • Yuemeng Li, Hongming Li, Yong Fan
However, existing 2D deep learning methods are not equipped to effectively capture 3D spatial contextual information that is needed to achieve accurate brain structure segmentation.
no code implementations • 7 May 2019 • Yuemeng Li, Hangfan Liu, Hongming Li, Yong Fan
In this way, the network is guaranteed to be aware of the class-dependent feature maps to facilitate the segmentation.
no code implementations • 15 Apr 2019 • Hongming Li, Mohamad Habes, David A. Wolk, Yong Fan
Introduction: It is challenging at baseline to predict when and which individuals who meet criteria for mild cognitive impairment (MCI) will ultimately progress to Alzheimer's disease (AD) dementia.
no code implementations • 5 Jan 2019 • Shi Yin, Zhengqiang Zhang, Hongming Li, Qinmu Peng, Xinge You, Susan L. Furth, Gregory E. Tasian, Yong Fan
It remains challenging to automatically segment kidneys in clinical ultrasound images due to the kidneys' varied shapes and image intensity distributions, although semi-automatic methods have achieved promising performance.
no code implementations • 5 Jan 2019 • Hongming Li, Pamela Boimel, James Janopaul-Naylor, Haoyu Zhong, Ying Xiao, Edgar Ben-Josef, Yong Fan
To improve existing survival analysis techniques whose performance is hinged on imaging features, we propose a deep learning method to build survival regression models by optimizing imaging features with deep convolutional neural networks (CNNs) in a proportional hazards model.
no code implementations • 5 Jan 2019 • Hongming Li, Yong Fan
Multi-modal biological, imaging, and neuropsychological markers have demonstrated promising performance for distinguishing Alzheimer's disease (AD) patients from cognitively normal elders.
no code implementations • 12 Nov 2018 • Shi Yin, Qinmu Peng, Hongming Li, Zhengqiang Zhang, Xinge You, Susan L. Furth, Gregory E. Tasian, Yong Fan
It remains challenging to automatically segment kidneys in clinical ultrasound (US) images due to the kidneys' varied shapes and image intensity distributions, although semi-automatic methods have achieved promising performance.
no code implementations • 14 Sep 2018 • Hongming Li, Xiaofeng Zhu, Yong Fan
We present a deep semi-nonnegative matrix factorization method for identifying subject-specific functional networks (FNs) at multiple spatial scales with a hierarchical organization from resting state fMRI data.
no code implementations • 14 Sep 2018 • Hongming Li, Yong Fan
Decoding brain functional states underlying different cognitive processes using multivariate pattern recognition techniques has attracted increasing interests in brain imaging studies.
no code implementations • 14 Sep 2018 • Hongming Li, Yong Fan
Dynamic functional connectivity analysis provides valuable information for understanding brain functional activity underlying different cognitive processes.
no code implementations • 11 Jan 2018 • Hongming Li, Yong Fan
A novel non-rigid image registration algorithm is built upon fully convolutional networks (FCNs) to optimize and learn spatial transformations between pairs of images to be registered in a self-supervised learning framework.
no code implementations • 11 Jan 2018 • Hongming Li, Theodore D. Satterthwaite, Yong Fan
Whole brain voxel-wise FC measures could provide fine-grained FC information of the brain and may improve the prediction performance.
no code implementations • 5 Sep 2017 • Hongming Li, Mohamad Habes, Yong Fan
Increasing effort in brain image analysis has been dedicated to early diagnosis of Alzheimer's disease (AD) based on neuroimaging data.
1 code implementation • 4 Sep 2017 • Hongming Li, Yong Fan
We propose a novel non-rigid image registration algorithm that is built upon fully convolutional networks (FCNs) to optimize and learn spatial transformations between pairs of images to be registered.