Search Results for author: Zongwei Zhou

Found 44 papers, 30 papers with code

Exploiting Structural Consistency of Chest Anatomy for Unsupervised Anomaly Detection in Radiography Images

no code implementations13 Mar 2024 Tiange Xiang, Yixiao Zhang, Yongyi Lu, Alan Yuille, Chaoyi Zhang, Weidong Cai, Zongwei Zhou

To this end, we propose a Simple Space-Aware Memory Matrix for In-painting and Detecting anomalies from radiography images (abbreviated as SimSID).

Anatomy Image Reconstruction +1

From Pixel to Cancer: Cellular Automata in Computed Tomography

no code implementations11 Mar 2024 Yuxiang Lai, Xiaoxi Chen, Angtian Wang, Alan Yuille, Zongwei Zhou

AI for cancer detection encounters the bottleneck of data scarcity, annotation difficulty, and low prevalence of early tumors.

Computed Tomography (CT)

Towards Generalizable Tumor Synthesis

no code implementations29 Feb 2024 Qi Chen, Xiaoxi Chen, Haorui Song, Zhiwei Xiong, Alan Yuille, Chen Wei, Zongwei Zhou

Tumor synthesis enables the creation of artificial tumors in medical images, facilitating the training of AI models for tumor detection and segmentation.

Computed Tomography (CT)

Leveraging AI Predicted and Expert Revised Annotations in Interactive Segmentation: Continual Tuning or Full Training?

1 code implementation29 Feb 2024 Tiezheng Zhang, Xiaoxi Chen, Chongyu Qu, Alan Yuille, Zongwei Zhou

Human experts revise the annotations predicted by AI, and in turn, AI improves its predictions by learning from these revised annotations.

Interactive Segmentation

Gemini: A Family of Highly Capable Multimodal Models

no code implementations The Keyword 2023 Gemini Team, Rohan Anil, Sebastian Borgeaud, Yonghui Wu, Jean-Baptiste Alayrac, Jiahui Yu, Radu Soricut, Johan Schalkwyk, Andrew M. Dai, Anja Hauth, Katie Millican, David Silver, Slav Petrov, Melvin Johnson, Ioannis Antonoglou, Julian Schrittwieser, Amelia Glaese, Jilin Chen, Emily Pitler, Timothy Lillicrap, Angeliki Lazaridou, Orhan Firat, James Molloy, Michael Isard, Paul R. Barham, Tom Hennigan, Benjamin Lee, Fabio Viola, Malcolm Reynolds, Yuanzhong Xu, Ryan Doherty, Eli Collins, Clemens Meyer, Eliza Rutherford, Erica Moreira, Kareem Ayoub, Megha Goel, George Tucker, Enrique Piqueras, Maxim Krikun, Iain Barr, Nikolay Savinov, Ivo Danihelka, Becca Roelofs, Anaïs White, Anders Andreassen, Tamara von Glehn, Lakshman Yagati, Mehran Kazemi, Lucas Gonzalez, Misha Khalman, Jakub Sygnowski, Alexandre Frechette, Charlotte Smith, Laura Culp, Lev Proleev, Yi Luan, Xi Chen, James Lottes, Nathan Schucher, Federico Lebron, Alban Rrustemi, Natalie Clay, Phil Crone, Tomas Kocisky, Jeffrey Zhao, Bartek Perz, Dian Yu, Heidi Howard, Adam Bloniarz, Jack W. Rae, Han Lu, Laurent SIfre, Marcello Maggioni, Fred Alcober, Dan Garrette, Megan Barnes, Shantanu Thakoor, Jacob Austin, Gabriel Barth-Maron, William Wong, Rishabh Joshi, Rahma Chaabouni, Deeni Fatiha, Arun Ahuja, Ruibo Liu, Yunxuan Li, Sarah Cogan, Jeremy Chen, Chao Jia, Chenjie Gu, Qiao Zhang, Jordan Grimstad, Ale Jakse Hartman, Martin Chadwick, Gaurav Singh Tomar, Xavier Garcia, Evan Senter, Emanuel Taropa, Thanumalayan Sankaranarayana Pillai, Jacob Devlin, Michael Laskin, Diego de Las Casas, Dasha Valter, Connie Tao, Lorenzo Blanco, Adrià Puigdomènech Badia, David Reitter, Mianna Chen, Jenny Brennan, Clara Rivera, Sergey Brin, Shariq Iqbal, Gabriela Surita, Jane Labanowski, Abhi Rao, Stephanie Winkler, Emilio Parisotto, Yiming Gu, Kate Olszewska, Yujing Zhang, Ravi Addanki, Antoine Miech, Annie Louis, Laurent El Shafey, Denis Teplyashin, Geoff Brown, Elliot Catt, Nithya Attaluri, Jan Balaguer, Jackie Xiang, Pidong Wang, Zoe Ashwood, Anton Briukhov, Albert Webson, Sanjay Ganapathy, Smit Sanghavi, Ajay Kannan, Ming-Wei Chang, Axel Stjerngren, Josip Djolonga, Yuting Sun, Ankur Bapna, Matthew Aitchison, Pedram Pejman, Henryk Michalewski, Tianhe Yu, Cindy Wang, Juliette Love, Junwhan Ahn, Dawn Bloxwich, Kehang Han, Peter Humphreys, Thibault Sellam, James Bradbury, Varun Godbole, Sina Samangooei, Bogdan Damoc, Alex Kaskasoli, Sébastien M. R. Arnold, Vijay Vasudevan, Shubham Agrawal, Jason Riesa, Dmitry Lepikhin, Richard Tanburn, Srivatsan Srinivasan, Hyeontaek Lim, Sarah Hodkinson, Pranav Shyam, Johan Ferret, Steven Hand, Ankush Garg, Tom Le Paine, Jian Li, Yujia Li, Minh Giang, Alexander Neitz, Zaheer Abbas, Sarah York, Machel Reid, Elizabeth Cole, Aakanksha Chowdhery, Dipanjan Das, Dominika Rogozińska, Vitaly Nikolaev, Pablo Sprechmann, Zachary Nado, Lukas Zilka, Flavien Prost, Luheng He, Marianne Monteiro, Gaurav Mishra, Chris Welty, Josh Newlan, Dawei Jia, Miltiadis Allamanis, Clara Huiyi Hu, Raoul de Liedekerke, Justin Gilmer, Carl Saroufim, Shruti Rijhwani, Shaobo Hou, Disha Shrivastava, Anirudh Baddepudi, Alex Goldin, Adnan Ozturel, Albin Cassirer, Yunhan Xu, Daniel Sohn, Devendra Sachan, Reinald Kim Amplayo, Craig Swanson, Dessie Petrova, Shashi Narayan, Arthur Guez, Siddhartha Brahma, Jessica Landon, Miteyan Patel, Ruizhe Zhao, Kevin Villela, Luyu Wang, Wenhao Jia, Matthew Rahtz, Mai Giménez, Legg Yeung, Hanzhao Lin, James Keeling, Petko Georgiev, Diana Mincu, Boxi Wu, Salem Haykal, Rachel Saputro, Kiran Vodrahalli, James Qin, Zeynep Cankara, Abhanshu Sharma, Nick Fernando, Will Hawkins, Behnam Neyshabur, Solomon Kim, Adrian Hutter, Priyanka Agrawal, Alex Castro-Ros, George van den Driessche, Tao Wang, Shuo-Yiin Chang, Paul Komarek, Ross Mcilroy, Mario Lučić, Guodong Zhang, Wael Farhan, Michael Sharman, Paul Natsev, Paul Michel, Yong Cheng, Yamini Bansal, Siyuan Qiao, Kris Cao, Siamak Shakeri, Christina Butterfield, Justin Chung, Paul Kishan Rubenstein, Shivani Agrawal, Arthur Mensch, Kedar Soparkar, Karel Lenc, Timothy Chung, Aedan Pope, Loren Maggiore, Jackie Kay, Priya Jhakra, Shibo Wang, Joshua Maynez, Mary Phuong, Taylor Tobin, Andrea Tacchetti, Maja Trebacz, Kevin Robinson, Yash Katariya, Sebastian Riedel, Paige Bailey, Kefan Xiao, Nimesh Ghelani, Lora Aroyo, Ambrose Slone, Neil Houlsby, Xuehan Xiong, Zhen Yang, Elena Gribovskaya, Jonas Adler, Mateo Wirth, Lisa Lee, Music Li, Thais Kagohara, Jay Pavagadhi, Sophie Bridgers, Anna Bortsova, Sanjay Ghemawat, Zafarali Ahmed, Tianqi Liu, Richard Powell, Vijay Bolina, Mariko Iinuma, Polina Zablotskaia, James Besley, Da-Woon Chung, Timothy Dozat, Ramona Comanescu, Xiance Si, Jeremy Greer, Guolong Su, Martin Polacek, Raphaël Lopez Kaufman, Simon Tokumine, Hexiang Hu, Elena Buchatskaya, Yingjie Miao, Mohamed Elhawaty, Aditya Siddhant, Nenad Tomasev, Jinwei Xing, Christina Greer, Helen Miller, Shereen Ashraf, Aurko Roy, Zizhao Zhang, Ada Ma, Angelos Filos, Milos Besta, Rory Blevins, Ted Klimenko, Chih-Kuan Yeh, Soravit Changpinyo, Jiaqi Mu, Oscar Chang, Mantas Pajarskas, Carrie Muir, Vered Cohen, Charline Le Lan, Krishna Haridasan, Amit Marathe, Steven Hansen, Sholto Douglas, Rajkumar Samuel, Mingqiu Wang, Sophia Austin, Chang Lan, Jiepu Jiang, Justin Chiu, Jaime Alonso Lorenzo, Lars Lowe Sjösund, Sébastien Cevey, Zach Gleicher, Thi Avrahami, Anudhyan Boral, Hansa Srinivasan, Vittorio Selo, Rhys May, Konstantinos Aisopos, Léonard Hussenot, Livio Baldini Soares, Kate Baumli, Michael B. Chang, Adrià Recasens, Ben Caine, Alexander Pritzel, Filip Pavetic, Fabio Pardo, Anita Gergely, Justin Frye, Vinay Ramasesh, Dan Horgan, Kartikeya Badola, Nora Kassner, Subhrajit Roy, Ethan Dyer, Víctor Campos, Alex Tomala, Yunhao Tang, Dalia El Badawy, Elspeth White, Basil Mustafa, Oran Lang, Abhishek Jindal, Sharad Vikram, Zhitao Gong, Sergi Caelles, Ross Hemsley, Gregory Thornton, Fangxiaoyu Feng, Wojciech Stokowiec, Ce Zheng, Phoebe Thacker, Çağlar Ünlü, Zhishuai Zhang, Mohammad Saleh, James Svensson, Max Bileschi, Piyush Patil, Ankesh Anand, Roman Ring, Katerina Tsihlas, Arpi Vezer, Marco Selvi, Toby Shevlane, Mikel Rodriguez, Tom Kwiatkowski, Samira Daruki, Keran Rong, Allan Dafoe, Nicholas FitzGerald, Keren Gu-Lemberg, Mina Khan, Lisa Anne Hendricks, Marie Pellat, Vladimir Feinberg, James Cobon-Kerr, Tara Sainath, Maribeth Rauh, Sayed Hadi Hashemi, Richard Ives, Yana Hasson, Yaguang Li, Eric Noland, Yuan Cao, Nathan Byrd, Le Hou, Qingze Wang, Thibault Sottiaux, Michela Paganini, Jean-Baptiste Lespiau, Alexandre Moufarek, Samer Hassan, Kaushik Shivakumar, Joost van Amersfoort, Amol Mandhane, Pratik Joshi, Anirudh Goyal, Matthew Tung, Andrew Brock, Hannah Sheahan, Vedant Misra, Cheng Li, Nemanja Rakićević, Mostafa Dehghani, Fangyu Liu, Sid Mittal, Junhyuk Oh, Seb Noury, Eren Sezener, Fantine Huot, Matthew Lamm, Nicola De Cao, Charlie Chen, Gamaleldin Elsayed, Ed Chi, Mahdis Mahdieh, Ian Tenney, Nan Hua, Ivan Petrychenko, Patrick Kane, Dylan Scandinaro, Rishub Jain, Jonathan Uesato, Romina Datta, Adam Sadovsky, Oskar Bunyan, Dominik Rabiej, Shimu Wu, John Zhang, Gautam Vasudevan, Edouard Leurent, Mahmoud Alnahlawi, Ionut Georgescu, Nan Wei, Ivy Zheng, Betty Chan, Pam G Rabinovitch, Piotr Stanczyk, Ye Zhang, David Steiner, Subhajit Naskar, Michael Azzam, Matthew Johnson, Adam Paszke, Chung-Cheng Chiu, Jaume Sanchez Elias, Afroz Mohiuddin, Faizan Muhammad, Jin Miao, Andrew Lee, Nino Vieillard, Sahitya Potluri, Jane Park, Elnaz Davoodi, Jiageng Zhang, Jeff Stanway, Drew Garmon, Abhijit Karmarkar, Zhe Dong, Jong Lee, Aviral Kumar, Luowei Zhou, Jonathan Evens, William Isaac, Zhe Chen, Johnson Jia, Anselm Levskaya, Zhenkai Zhu, Chris Gorgolewski, Peter Grabowski, Yu Mao, Alberto Magni, Kaisheng Yao, Javier Snaider, Norman Casagrande, Paul Suganthan, Evan Palmer, Geoffrey Irving, Edward Loper, Manaal Faruqui, Isha Arkatkar, Nanxin Chen, Izhak Shafran, Michael Fink, Alfonso Castaño, Irene Giannoumis, Wooyeol Kim, Mikołaj Rybiński, Ashwin Sreevatsa, Jennifer Prendki, David Soergel, Adrian Goedeckemeyer, Willi Gierke, Mohsen Jafari, Meenu Gaba, Jeremy Wiesner, Diana Gage Wright, Yawen Wei, Harsha Vashisht, Yana Kulizhskaya, Jay Hoover, Maigo Le, Lu Li, Chimezie Iwuanyanwu, Lu Liu, Kevin Ramirez, Andrey Khorlin, Albert Cui, Tian Lin, Marin Georgiev, Marcus Wu, Ricardo Aguilar, Keith Pallo, Abhishek Chakladar, Alena Repina, Xihui Wu, Tom van der Weide, Priya Ponnapalli, Caroline Kaplan, Jiri Simsa, Shuangfeng Li, Olivier Dousse, Jeff Piper, Nathan Ie, Minnie Lui, Rama Pasumarthi, Nathan Lintz, Anitha Vijayakumar, Lam Nguyen Thiet, Daniel Andor, Pedro Valenzuela, Cosmin Paduraru, Daiyi Peng, Katherine Lee, Shuyuan Zhang, Somer Greene, Duc Dung Nguyen, Paula Kurylowicz, Sarmishta Velury, Sebastian Krause, Cassidy Hardin, Lucas Dixon, Lili Janzer, Kiam Choo, Ziqiang Feng, Biao Zhang, Achintya Singhal, Tejasi Latkar, Mingyang Zhang, Quoc Le, Elena Allica Abellan, Dayou Du, Dan McKinnon, Natasha Antropova, Tolga Bolukbasi, Orgad Keller, David Reid, Daniel Finchelstein, Maria Abi Raad, Remi Crocker, Peter Hawkins, Robert Dadashi, Colin Gaffney, Sid Lall, Ken Franko, Egor Filonov, Anna Bulanova, Rémi Leblond, Vikas Yadav, Shirley Chung, Harry Askham, Luis C. Cobo, Kelvin Xu, Felix Fischer, Jun Xu, Christina Sorokin, Chris Alberti, Chu-Cheng Lin, Colin Evans, Hao Zhou, Alek Dimitriev, Hannah Forbes, Dylan Banarse, Zora Tung, Jeremiah Liu, Mark Omernick, Colton Bishop, Chintu Kumar, Rachel Sterneck, Ryan Foley, Rohan Jain, Swaroop Mishra, Jiawei Xia, Taylor Bos, Geoffrey Cideron, Ehsan Amid, Francesco Piccinno, Xingyu Wang, Praseem Banzal, Petru Gurita, Hila Noga, Premal Shah, Daniel J. Mankowitz, Alex Polozov, Nate Kushman, Victoria Krakovna, Sasha Brown, Mohammadhossein Bateni, Dennis Duan, Vlad Firoiu, Meghana Thotakuri, Tom Natan, Anhad Mohananey, Matthieu Geist, Sidharth Mudgal, Sertan Girgin, Hui Li, Jiayu Ye, Ofir Roval, Reiko Tojo, Michael Kwong, James Lee-Thorp, Christopher Yew, Quan Yuan, Sumit Bagri, Danila Sinopalnikov, Sabela Ramos, John Mellor, Abhishek Sharma, Aliaksei Severyn, Jonathan Lai, Kathy Wu, Heng-Tze Cheng, David Miller, Nicolas Sonnerat, Denis Vnukov, Rory Greig, Jennifer Beattie, Emily Caveness, Libin Bai, Julian Eisenschlos, Alex Korchemniy, Tomy Tsai, Mimi Jasarevic, Weize Kong, Phuong Dao, Zeyu Zheng, Frederick Liu, Fan Yang, Rui Zhu, Mark Geller, Tian Huey Teh, Jason Sanmiya, Evgeny Gladchenko, Nejc Trdin, Andrei Sozanschi, Daniel Toyama, Evan Rosen, Sasan Tavakkol, Linting Xue, Chen Elkind, Oliver Woodman, John Carpenter, George Papamakarios, Rupert Kemp, Sushant Kafle, Tanya Grunina, Rishika Sinha, Alice Talbert, Abhimanyu Goyal, Diane Wu, Denese Owusu-Afriyie, Cosmo Du, Chloe Thornton, Jordi Pont-Tuset, Pradyumna Narayana, Jing Li, Sabaer Fatehi, John Wieting, Omar Ajmeri, Benigno Uria, Tao Zhu, Yeongil Ko, Laura Knight, Amélie Héliou, Ning Niu, Shane Gu, Chenxi Pang, Dustin Tran, Yeqing Li, Nir Levine, Ariel Stolovich, Norbert Kalb, Rebeca Santamaria-Fernandez, Sonam Goenka, Wenny Yustalim, Robin Strudel, Ali Elqursh, Balaji Lakshminarayanan, Charlie Deck, Shyam Upadhyay, Hyo Lee, Mike Dusenberry, Zonglin Li, Xuezhi Wang, Kyle Levin, Raphael Hoffmann, Dan Holtmann-Rice, Olivier Bachem, Summer Yue, Sho Arora, Eric Malmi, Daniil Mirylenka, Qijun Tan, Christy Koh, Soheil Hassas Yeganeh, Siim Põder, Steven Zheng, Francesco Pongetti, Mukarram Tariq, Yanhua Sun, Lucian Ionita, Mojtaba Seyedhosseini, Pouya Tafti, Ragha Kotikalapudi, Zhiyu Liu, Anmol Gulati, Jasmine Liu, Xinyu Ye, Bart Chrzaszcz, Lily Wang, Nikhil Sethi, Tianrun Li, Ben Brown, Shreya Singh, Wei Fan, Aaron Parisi, Joe Stanton, Chenkai Kuang, Vinod Koverkathu, Christopher A. Choquette-Choo, Yunjie Li, TJ Lu, Abe Ittycheriah, Prakash Shroff, Pei Sun, Mani Varadarajan, Sanaz Bahargam, Rob Willoughby, David Gaddy, Ishita Dasgupta, Guillaume Desjardins, Marco Cornero, Brona Robenek, Bhavishya Mittal, Ben Albrecht, Ashish Shenoy, Fedor Moiseev, Henrik Jacobsson, Alireza Ghaffarkhah, Morgane Rivière, Alanna Walton, Clément Crepy, Alicia Parrish, YuAn Liu, Zongwei Zhou, Clement Farabet, Carey Radebaugh, Praveen Srinivasan, Claudia van der Salm, Andreas Fidjeland, Salvatore Scellato, Eri Latorre-Chimoto, Hanna Klimczak-Plucińska, David Bridson, Dario de Cesare, Tom Hudson, Piermaria Mendolicchio, Lexi Walker, Alex Morris, Ivo Penchev, Matthew Mauger, Alexey Guseynov, Alison Reid, Seth Odoom, Lucia Loher, Victor Cotruta, Madhavi Yenugula, Dominik Grewe, Anastasia Petrushkina, Tom Duerig, Antonio Sanchez, Steve Yadlowsky, Amy Shen, Amir Globerson, Adam Kurzrok, Lynette Webb, Sahil Dua, Dong Li, Preethi Lahoti, Surya Bhupatiraju, Dan Hurt, Haroon Qureshi, Ananth Agarwal, Tomer Shani, Matan Eyal, Anuj Khare, Shreyas Rammohan Belle, Lei Wang, Chetan Tekur, Mihir Sanjay Kale, Jinliang Wei, Ruoxin Sang, Brennan Saeta, Tyler Liechty, Yi Sun, Yao Zhao, Stephan Lee, Pandu Nayak, Doug Fritz, Manish Reddy Vuyyuru, John Aslanides, Nidhi Vyas, Martin Wicke, Xiao Ma, Taylan Bilal, Evgenii Eltyshev, Daniel Balle, Nina Martin, Hardie Cate, James Manyika, Keyvan Amiri, Yelin Kim, Xi Xiong, Kai Kang, Florian Luisier, Nilesh Tripuraneni, David Madras, Mandy Guo, Austin Waters, Oliver Wang, Joshua Ainslie, Jason Baldridge, Han Zhang, Garima Pruthi, Jakob Bauer, Feng Yang, Riham Mansour, Jason Gelman, Yang Xu, George Polovets, Ji Liu, Honglong Cai, Warren Chen, XiangHai Sheng, Emily Xue, Sherjil Ozair, Adams Yu, Christof Angermueller, Xiaowei Li, Weiren Wang, Julia Wiesinger, Emmanouil Koukoumidis, Yuan Tian, Anand Iyer, Madhu Gurumurthy, Mark Goldenson, Parashar Shah, MK Blake, Hongkun Yu, Anthony Urbanowicz, Jennimaria Palomaki, Chrisantha Fernando, Kevin Brooks, Ken Durden, Harsh Mehta, Nikola Momchev, Elahe Rahimtoroghi, Maria Georgaki, Amit Raul, Sebastian Ruder, Morgan Redshaw, Jinhyuk Lee, Komal Jalan, Dinghua Li, Ginger Perng, Blake Hechtman, Parker Schuh, Milad Nasr, Mia Chen, Kieran Milan, Vladimir Mikulik, Trevor Strohman, Juliana Franco, Tim Green, Demis Hassabis, Koray Kavukcuoglu, Jeffrey Dean, Oriol Vinyals

This report introduces a new family of multimodal models, Gemini, that exhibit remarkable capabilities across image, audio, video, and text understanding.

Arithmetic Reasoning Code Generation +3

Structure-Aware Sparse-View X-ray 3D Reconstruction

1 code implementation18 Nov 2023 Yuanhao Cai, Jiahao Wang, Zongwei Zhou, Angtian Wang, Alan Yuille

In this paper, we propose a framework, Structure-Aware X-ray Neural Radiodensity Fields (SAX-NeRF), for sparse-view X-ray 3D reconstruction.

3D Reconstruction Low-Dose X-Ray Ct Reconstruction +1

Synthetic Data as Validation

no code implementations24 Oct 2023 Qixin Hu, Alan Yuille, Zongwei Zhou

Specifically, the DSC score for liver tumor segmentation improves from 26. 7% (95% CI: 22. 6%-30. 9%) to 34. 5% (30. 8%-38. 2%) when evaluated on an in-domain dataset and from 31. 1% (26. 0%-36. 2%) to 35. 4% (32. 1%-38. 7%) on an out-domain dataset.

Computed Tomography (CT) Continual Learning +1

Acquiring Weak Annotations for Tumor Localization in Temporal and Volumetric Data

1 code implementation23 Oct 2023 Yu-Cheng Chou, Bowen Li, Deng-Ping Fan, Alan Yuille, Zongwei Zhou

In summary, this research proposes an efficient annotation strategy for tumor detection and localization that is less accurate than per-pixel annotations but useful for creating large-scale datasets for screening tumors in various medical modalities.

Weakly-supervised Learning

Boosting Dermatoscopic Lesion Segmentation via Diffusion Models with Visual and Textual Prompts

no code implementations4 Oct 2023 Shiyi Du, Xiaosong Wang, Yongyi Lu, Yuyin Zhou, Shaoting Zhang, Alan Yuille, Kang Li, Zongwei Zhou

Image synthesis approaches, e. g., generative adversarial networks, have been popular as a form of data augmentation in medical image analysis tasks.

Data Augmentation Image Generation +2

MedShapeNet -- A Large-Scale Dataset of 3D Medical Shapes for Computer Vision

1 code implementation30 Aug 2023 Jianning Li, Zongwei Zhou, Jiancheng Yang, Antonio Pepe, Christina Gsaxner, Gijs Luijten, Chongyu Qu, Tiezheng Zhang, Xiaoxi Chen, Wenxuan Li, Marek Wodzinski, Paul Friedrich, Kangxian Xie, Yuan Jin, Narmada Ambigapathy, Enrico Nasca, Naida Solak, Gian Marco Melito, Viet Duc Vu, Afaque R. Memon, Christopher Schlachta, Sandrine de Ribaupierre, Rajnikant Patel, Roy Eagleson, Xiaojun Chen, Heinrich Mächler, Jan Stefan Kirschke, Ezequiel de la Rosa, Patrick Ferdinand Christ, Hongwei Bran Li, David G. Ellis, Michele R. Aizenberg, Sergios Gatidis, Thomas Küstner, Nadya Shusharina, Nicholas Heller, Vincent Andrearczyk, Adrien Depeursinge, Mathieu Hatt, Anjany Sekuboyina, Maximilian Löffler, Hans Liebl, Reuben Dorent, Tom Vercauteren, Jonathan Shapey, Aaron Kujawa, Stefan Cornelissen, Patrick Langenhuizen, Achraf Ben-Hamadou, Ahmed Rekik, Sergi Pujades, Edmond Boyer, Federico Bolelli, Costantino Grana, Luca Lumetti, Hamidreza Salehi, Jun Ma, Yao Zhang, Ramtin Gharleghi, Susann Beier, Arcot Sowmya, Eduardo A. Garza-Villarreal, Thania Balducci, Diego Angeles-Valdez, Roberto Souza, Leticia Rittner, Richard Frayne, Yuanfeng Ji, Vincenzo Ferrari, Soumick Chatterjee, Florian Dubost, Stefanie Schreiber, Hendrik Mattern, Oliver Speck, Daniel Haehn, Christoph John, Andreas Nürnberger, João Pedrosa, Carlos Ferreira, Guilherme Aresta, António Cunha, Aurélio Campilho, Yannick Suter, Jose Garcia, Alain Lalande, Vicky Vandenbossche, Aline Van Oevelen, Kate Duquesne, Hamza Mekhzoum, Jef Vandemeulebroucke, Emmanuel Audenaert, Claudia Krebs, Timo Van Leeuwen, Evie Vereecke, Hauke Heidemeyer, Rainer Röhrig, Frank Hölzle, Vahid Badeli, Kathrin Krieger, Matthias Gunzer, Jianxu Chen, Timo van Meegdenburg, Amin Dada, Miriam Balzer, Jana Fragemann, Frederic Jonske, Moritz Rempe, Stanislav Malorodov, Fin H. Bahnsen, Constantin Seibold, Alexander Jaus, Zdravko Marinov, Paul F. Jaeger, Rainer Stiefelhagen, Ana Sofia Santos, Mariana Lindo, André Ferreira, Victor Alves, Michael Kamp, Amr Abourayya, Felix Nensa, Fabian Hörst, Alexander Brehmer, Lukas Heine, Yannik Hanusrichter, Martin Weßling, Marcel Dudda, Lars E. Podleska, Matthias A. Fink, Julius Keyl, Konstantinos Tserpes, Moon-Sung Kim, Shireen Elhabian, Hans Lamecker, Dženan Zukić, Beatriz Paniagua, Christian Wachinger, Martin Urschler, Luc Duong, Jakob Wasserthal, Peter F. Hoyer, Oliver Basu, Thomas Maal, Max J. H. Witjes, Gregor Schiele, Ti-chiun Chang, Seyed-Ahmad Ahmadi, Ping Luo, Bjoern Menze, Mauricio Reyes, Thomas M. Deserno, Christos Davatzikos, Behrus Puladi, Pascal Fua, Alan L. Yuille, Jens Kleesiek, Jan Egger

For the medical domain, we present a large collection of anatomical shapes (e. g., bones, organs, vessels) and 3D models of surgical instrument, called MedShapeNet, created to facilitate the translation of data-driven vision algorithms to medical applications and to adapt SOTA vision algorithms to medical problems.

Anatomy Mixed Reality

Early Detection and Localization of Pancreatic Cancer by Label-Free Tumor Synthesis

1 code implementation6 Aug 2023 Bowen Li, Yu-Cheng Chou, Shuwen Sun, Hualin Qiao, Alan Yuille, Zongwei Zhou

We further investigate the per-voxel segmentation performance of pancreatic tumors if AI is trained on a combination of CT scans with synthetic tumors and CT scans with annotated large tumors at an advanced stage.

Specificity

Continual Learning for Abdominal Multi-Organ and Tumor Segmentation

1 code implementation1 Jun 2023 Yixiao Zhang, Xinyi Li, Huimiao Chen, Alan Yuille, Yaoyao Liu, Zongwei Zhou

The ability to dynamically extend a model to new data and classes is critical for multiple organ and tumor segmentation.

Continual Learning Organ Segmentation +2

Label-Free Liver Tumor Segmentation

1 code implementation CVPR 2023 Qixin Hu, Yixiong Chen, Junfei Xiao, Shuwen Sun, Jieneng Chen, Alan Yuille, Zongwei Zhou

We demonstrate that AI models can accurately segment liver tumors without the need for manual annotation by using synthetic tumors in CT scans.

Segmentation Tumor Segmentation

CLIP-Driven Universal Model for Organ Segmentation and Tumor Detection

2 code implementations ICCV 2023 Jie Liu, Yixiao Zhang, Jie-Neng Chen, Junfei Xiao, Yongyi Lu, Bennett A. Landman, Yixuan Yuan, Alan Yuille, Yucheng Tang, Zongwei Zhou

The proposed model is developed from an assembly of 14 datasets, using a total of 3, 410 CT scans for training and then evaluated on 6, 162 external CT scans from 3 additional datasets.

Organ Segmentation Segmentation +1

Delving into Masked Autoencoders for Multi-Label Thorax Disease Classification

1 code implementation23 Oct 2022 Junfei Xiao, Yutong Bai, Alan Yuille, Zongwei Zhou

We hope that this study can direct future research on the application of Transformers to a larger variety of medical imaging tasks.

Computational Efficiency Transfer Learning

Making Your First Choice: To Address Cold Start Problem in Vision Active Learning

1 code implementation5 Oct 2022 Liangyu Chen, Yutong Bai, Siyu Huang, Yongyi Lu, Bihan Wen, Alan L. Yuille, Zongwei Zhou

However, we uncover a striking contradiction to this promise: active learning fails to select data as efficiently as random selection at the first few choices.

Active Learning Contrastive Learning

Unsupervised Domain Adaptation through Shape Modeling for Medical Image Segmentation

1 code implementation6 Jul 2022 Yuan YAO, Fengze Liu, Zongwei Zhou, Yan Wang, Wei Shen, Alan Yuille, Yongyi Lu

Previous methods proposed Variational Autoencoder (VAE) based models to learn the distribution of shape for a particular organ and used it to automatically evaluate the quality of a segmentation prediction by fitting it into the learned shape distribution.

Image Segmentation Pancreas Segmentation +3

MetaLR: Meta-tuning of Learning Rates for Transfer Learning in Medical Imaging

1 code implementation3 Jun 2022 Yixiong Chen, Li Liu, Jingxian Li, Hua Jiang, Chris Ding, Zongwei Zhou

In this work, we propose a meta-learning-based LR tuner, named MetaLR, to make different layers automatically co-adapt to downstream tasks based on their transferabilities across domains.

Meta-Learning Transfer Learning

AutoDistill: an End-to-End Framework to Explore and Distill Hardware-Efficient Language Models

no code implementations21 Jan 2022 Xiaofan Zhang, Zongwei Zhou, Deming Chen, Yu Emma Wang

By evaluating on SQuAD, a model found by AutoDistill achieves an 88. 4% F1 score with 22. 8M parameters, which reduces parameters by more than 62% while maintaining higher accuracy than DistillBERT, TinyBERT, and NAS-BERT.

Bayesian Optimization Knowledge Distillation +2

MT-TransUNet: Mediating Multi-Task Tokens in Transformers for Skin Lesion Segmentation and Classification

1 code implementation3 Dec 2021 Jingye Chen, Jieneng Chen, Zongwei Zhou, Bin Li, Alan Yuille, Yongyi Lu

However, these approaches formulated skin cancer diagnosis as a simple classification task, dismissing the potential benefit from lesion segmentation.

Classification Computational Efficiency +4

SQUID: Deep Feature In-Painting for Unsupervised Anomaly Detection

1 code implementation CVPR 2023 Tiange Xiang, Yixiao Zhang, Yongyi Lu, Alan L. Yuille, Chaoyi Zhang, Weidong Cai, Zongwei Zhou

Radiography imaging protocols focus on particular body regions, therefore producing images of great similarity and yielding recurrent anatomical structures across patients.

Anatomy Unsupervised Anomaly Detection

Learning from Temporal Gradient for Semi-supervised Action Recognition

1 code implementation CVPR 2022 Junfei Xiao, Longlong Jing, Lin Zhang, Ju He, Qi She, Zongwei Zhou, Alan Yuille, Yingwei Li

Our method achieves the state-of-the-art performance on three video action recognition benchmarks (i. e., Kinetics-400, UCF-101, and HMDB-51) under several typical semi-supervised settings (i. e., different ratios of labeled data).

Action Recognition Temporal Action Localization

Label-Assemble: Leveraging Multiple Datasets with Partial Labels

2 code implementations25 Sep 2021 Mintong Kang, Bowen Li, Zengle Zhu, Yongyi Lu, Elliot K. Fishman, Alan L. Yuille, Zongwei Zhou

We discovered that learning from negative examples facilitates both computer-aided disease diagnosis and detection.

COVID-19 Diagnosis Specificity

Seeking an Optimal Approach for Computer-Aided Pulmonary Embolism Detection

2 code implementations15 Sep 2021 Nahid Ul Islam, Shiv Gehlot, Zongwei Zhou, Michael B Gotway, Jianming Liang

At the image level, we compare convolutional neural networks (CNNs) with vision transformers, and contrast self-supervised learning (SSL) with supervised learning, followed by an evaluation of transfer learning compared with training from scratch.

Multiple Instance Learning Pulmonary Embolism Detection +2

CateNorm: Categorical Normalization for Robust Medical Image Segmentation

1 code implementation29 Mar 2021 Junfei Xiao, Lequan Yu, Zongwei Zhou, Yutong Bai, Lei Xing, Alan Yuille, Yuyin Zhou

We propose a new normalization strategy, named categorical normalization (CateNorm), to normalize the activations according to categorical statistics.

Image Segmentation Medical Image Segmentation +2

Learning Semantics-enriched Representation via Self-discovery, Self-classification, and Self-restoration

2 code implementations14 Jul 2020 Fatemeh Haghighi, Mohammad Reza Hosseinzadeh Taher, Zongwei Zhou, Michael B. Gotway, Jianming Liang

To this end, we train deep models to learn semantically enriched visual representation by self-discovery, self-classification, and self-restoration of the anatomy underneath medical images, resulting in a semantics-enriched, general-purpose, pre-trained 3D model, named Semantic Genesis.

Anatomy Brain Tumor Segmentation +7

Models Genesis

1 code implementation9 Apr 2020 Zongwei Zhou, Vatsal Sodha, Jiaxuan Pang, Michael B. Gotway, Jianming Liang

Transfer learning from natural images to medical images has been established as one of the most practical paradigms in deep learning for medical image analysis.

Anatomy Self-Supervised Learning +1

Scale MLPerf-0.6 models on Google TPU-v3 Pods

no code implementations21 Sep 2019 Sameer Kumar, Victor Bitorff, Dehao Chen, Chiachen Chou, Blake Hechtman, HyoukJoong Lee, Naveen Kumar, Peter Mattson, Shibo Wang, Tao Wang, Yuanzhong Xu, Zongwei Zhou

The recent submission of Google TPU-v3 Pods to the industry wide MLPerf v0. 6 training benchmark demonstrates the scalability of a suite of industry relevant ML models.

Benchmarking

Models Genesis: Generic Autodidactic Models for 3D Medical Image Analysis

2 code implementations19 Aug 2019 Zongwei Zhou, Vatsal Sodha, Md Mahfuzur Rahman Siddiquee, Ruibin Feng, Nima Tajbakhsh, Michael B. Gotway, Jianming Liang

More importantly, learning a model from scratch simply in 3D may not necessarily yield performance better than transfer learning from ImageNet in 2D, but our Models Genesis consistently top any 2D approaches including fine-tuning the models pre-trained from ImageNet as well as fine-tuning the 2D versions of our Models Genesis, confirming the importance of 3D anatomical information and significance of our Models Genesis for 3D medical imaging.

Anatomy Brain Tumor Segmentation +6

Learning Fixed Points in Generative Adversarial Networks: From Image-to-Image Translation to Disease Detection and Localization

1 code implementation ICCV 2019 Md Mahfuzur Rahman Siddiquee, Zongwei Zhou, Nima Tajbakhsh, Ruibin Feng, Michael B. Gotway, Yoshua Bengio, Jianming Liang

Qualitative and quantitative evaluations demonstrate that the proposed method outperforms the state of the art in multi-domain image-to-image translation and that it surpasses predominant weakly-supervised localization methods in both disease detection and localization.

domain classification Image-to-Image Translation +1

UNet++: A Nested U-Net Architecture for Medical Image Segmentation

32 code implementations18 Jul 2018 Zongwei Zhou, Md Mahfuzur Rahman Siddiquee, Nima Tajbakhsh, Jianming Liang

Implementation of different kinds of Unet Models for Image Segmentation - Unet , RCNN-Unet, Attention Unet, RCNN-Attention Unet, Nested Unet

Image Segmentation Segmentation +3

Active, Continual Fine Tuning of Convolutional Neural Networks for Reducing Annotation Efforts

1 code implementation3 Feb 2018 Zongwei Zhou, Jae Y. Shin, Suryakanth R. Gurudu, Michael B. Gotway, Jianming Liang

The splendid success of convolutional neural networks (CNNs) in computer vision is largely attributable to the availability of massive annotated datasets, such as ImageNet and Places.

Active Learning Transfer Learning

Fine-Tuning Convolutional Neural Networks for Biomedical Image Analysis: Actively and Incrementally

no code implementations CVPR 2017 Zongwei Zhou, Jae Shin, Lei Zhang, Suryakanth Gurudu, Michael Gotway, Jianming Liang

Intense interest in applying convolutional neural networks (CNNs) in biomedical image analysis is wide spread, but its success is impeded by the lack of large annotated datasets in biomedical imaging.

Active Learning Transfer Learning

Comparison of machine learning methods for classifying mediastinal lymph node metastasis of non-small cell lung cancer from 18F-FDG PET/CT images

no code implementations7 Feb 2017 Hongkai Wang, Zongwei Zhou, Yingci Li, Zhonghua Chen, Peiou Lu, Wenzhi Wang, Wanyu Liu, Lijuan Yu

The present study shows that the performance of CNN is not significantly different from the best classical methods and human doctors for classifying mediastinal lymph node metastasis of NSCLC from PET/CT images.

Tumor Segmentation

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